Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm4294-201ENSMUST00000105169 614 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm11500-201ENSMUST00000118237 601 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm14395-201ENSMUST00000120494 563 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm15329-201ENSMUST00000121408 155 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Mir6958-201ENSMUST00000184207 73 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.75□□□□□ -0.53
Rc3h2P0C090 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rc3h2P0C090 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm14071-201ENSMUST00000117817 509 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm15744-201ENSMUST00000161734 213 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm26134-201ENSMUST00000178484 110 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm5468-202ENSMUST00000227851 682 ntBASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rc3h2P0C090 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rc3h2P0C090 Gm14892-201ENSMUST00000117636 267 ntBASIC11.73□□□□□ -0.53
Rc3h2P0C090 Gm16219-201ENSMUST00000120096 274 ntBASIC11.73□□□□□ -0.53
Rc3h2P0C090 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms