Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Snord17-201ENSMUST00000104526 238 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm5529-201ENSMUST00000165691 891 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm9372-201ENSMUST00000168454 430 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Snord55-201ENSMUST00000174939 79 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm26272-201ENSMUST00000179241 132 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm9507-202ENSMUST00000180157 654 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.8□□□□□ -0.04
Hoxc9P09633 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm42867-201ENSMUST00000202995 469 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm4903-201ENSMUST00000210462 405 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.8□□□□□ -0.04
Hoxc9P09633 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm11952-201ENSMUST00000121172 821 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm20781-201ENSMUST00000193154 693 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm21736-201ENSMUST00000195399 693 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm43002-201ENSMUST00000200310 155 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm43506-201ENSMUST00000200675 753 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 BC106175-202ENSMUST00000219344 1213 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm5178-201ENSMUST00000219380 898 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.79□□□□□ -0.04
Hoxc9P09633 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.79□□□□□ -0.04
Hoxc9P09633 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hoxc9P09633 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc9P09633 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Hoxc9P09633 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm13039-201ENSMUST00000118638 794 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm16165-201ENSMUST00000160140 795 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23400-201ENSMUST00000174994 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm26463-201ENSMUST00000175065 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm24332-201ENSMUST00000175102 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25959-201ENSMUST00000175112 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm22475-201ENSMUST00000175169 102 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms