Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm15528-201ENSMUST00000117821 864 ntBASIC12.17□□□□□ -0.46
TnfP06804 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.17□□□□□ -0.46
TnfP06804 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Olfml3-204ENSMUST00000169286 874 ntBASIC12.17□□□□□ -0.46
TnfP06804 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.17□□□□□ -0.46
TnfP06804 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Gm26134-201ENSMUST00000178484 110 ntBASIC12.17□□□□□ -0.46
TnfP06804 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Gm5100-201ENSMUST00000195631 589 ntBASIC12.17□□□□□ -0.46
TnfP06804 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.17□□□□□ -0.46
TnfP06804 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.17□□□□□ -0.46
TnfP06804 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
TnfP06804 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.17□□□□□ -0.46
TnfP06804 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.16□□□□□ -0.46
TnfP06804 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
TnfP06804 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gm29410-201ENSMUST00000188383 694 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gm42816-201ENSMUST00000198433 325 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gm43966-201ENSMUST00000203301 612 ntBASIC12.16□□□□□ -0.46
TnfP06804 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.16□□□□□ -0.46
TnfP06804 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gm30671-201ENSMUST00000214898 318 ntBASIC12.16□□□□□ -0.46
TnfP06804 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.16□□□□□ -0.46
TnfP06804 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TnfP06804 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.16□□□□□ -0.46
TnfP06804 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TnfP06804 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.16□□□□□ -0.46
TnfP06804 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.16□□□□□ -0.46
TnfP06804 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TnfP06804 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TnfP06804 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Erich3-203ENSMUST00000189969 3460 ntBASIC12.15□□□□□ -0.46
TnfP06804 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TnfP06804 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
TnfP06804 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TnfP06804 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Gm25063-201ENSMUST00000104666 94 ntBASIC12.15□□□□□ -0.46
TnfP06804 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TnfP06804 Gm8302-201ENSMUST00000119217 852 ntBASIC12.15□□□□□ -0.46
TnfP06804 Gm13117-201ENSMUST00000120894 691 ntBASIC12.15□□□□□ -0.46
TnfP06804 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms