Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
P04224 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.07□□□□□ -0.8
P04224 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
P04224 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P04224 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.07□□□□□ -0.8
P04224 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.07□□□□□ -0.8
P04224 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Gm12390-201ENSMUST00000117897 397 ntBASIC10.07□□□□□ -0.8
P04224 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P04224 Gm13570-201ENSMUST00000140763 309 ntBASIC10.07□□□□□ -0.8
P04224 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.07□□□□□ -0.8
P04224 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.07□□□□□ -0.8
P04224 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P04224 Gm42937-201ENSMUST00000197360 752 ntBASIC10.07□□□□□ -0.8
P04224 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.07□□□□□ -0.8
P04224 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.07□□□□□ -0.8
P04224 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
P04224 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P04224 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.07□□□□□ -0.8
P04224 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.07□□□□□ -0.8
P04224 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
P04224 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.07□□□□□ -0.8
P04224 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
P04224 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.07□□□□□ -0.8
P04224 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P04224 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P04224 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
P04224 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
P04224 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gm43112-201ENSMUST00000196665 3122 ntBASIC10.06□□□□□ -0.8
P04224 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
P04224 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.06□□□□□ -0.8
P04224 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.06□□□□□ -0.8
P04224 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
P04224 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.06□□□□□ -0.8
P04224 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
P04224 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.06□□□□□ -0.8
P04224 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.06□□□□□ -0.8
P04224 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms