Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
TcraP01849 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TcraP01849 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC8.37□□□□□ -1.07
TcraP01849 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
TcraP01849 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm15824-201ENSMUST00000119516 955 ntBASIC8.37□□□□□ -1.07
TcraP01849 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC8.37□□□□□ -1.07
TcraP01849 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm7029-201ENSMUST00000173226 450 ntBASIC8.37□□□□□ -1.07
TcraP01849 Gm8602-201ENSMUST00000184045 607 ntBASIC8.37□□□□□ -1.07
TcraP01849 Gm37748-201ENSMUST00000194379 1140 ntBASIC8.37□□□□□ -1.07
TcraP01849 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC8.37□□□□□ -1.07
TcraP01849 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
TcraP01849 Gm32025-201ENSMUST00000217960 307 ntBASIC8.37□□□□□ -1.07
TcraP01849 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm5781-201ENSMUST00000219792 443 ntBASIC8.37□□□□□ -1.07
TcraP01849 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm10254-201ENSMUST00000052888 867 ntBASIC8.37□□□□□ -1.07
TcraP01849 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
TcraP01849 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC8.37□□□□□ -1.07
TcraP01849 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.37□□□□□ -1.07
TcraP01849 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC8.37□□□□□ -1.07
TcraP01849 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.36□□□□□ -1.07
TcraP01849 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.36□□□□□ -1.07
TcraP01849 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.36□□□□□ -1.07
TcraP01849 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC8.36□□□□□ -1.07
TcraP01849 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm9431-201ENSMUST00000119765 1051 ntBASIC8.36□□□□□ -1.07
TcraP01849 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC8.36□□□□□ -1.07
TcraP01849 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.36□□□□□ -1.07
TcraP01849 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC8.36□□□□□ -1.07
TcraP01849 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm8018-201ENSMUST00000173536 789 ntBASIC8.36□□□□□ -1.07
TcraP01849 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
TcraP01849 Gm27682-201ENSMUST00000183930 110 ntBASIC8.36□□□□□ -1.07
TcraP01849 Gm42693-201ENSMUST00000196779 631 ntBASIC8.36□□□□□ -1.07
TcraP01849 Gm18584-201ENSMUST00000203098 964 ntBASIC8.36□□□□□ -1.07
TcraP01849 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC8.36□□□□□ -1.07
TcraP01849 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms