Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm15620-201ENSMUST00000122949 270 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm3329-201ENSMUST00000159873 556 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm20414-201ENSMUST00000172918 646 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm44814-201ENSMUST00000207018 434 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm19640-201ENSMUST00000214849 464 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Gm9487-201ENSMUST00000216600 472 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.63□□□□□ -0.39
Trdmt1O55055 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trdmt1O55055 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdmt1O55055 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Snord23-201ENSMUST00000116828 109 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm12712-201ENSMUST00000120676 801 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm19246-201ENSMUST00000173599 255 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm34379-201ENSMUST00000195036 290 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm25580-201ENSMUST00000083409 327 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.62□□□□□ -0.39
Trdmt1O55055 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trdmt1O55055 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdmt1O55055 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms