Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npc1O35604 Gm11700-201ENSMUST00000119409 403 ntBASIC11.22□□□□□ -0.61
Npc1O35604 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.22□□□□□ -0.61
Npc1O35604 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.22□□□□□ -0.61
Npc1O35604 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.22□□□□□ -0.61
Npc1O35604 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Gm17391-201ENSMUST00000171036 126 ntBASIC11.22□□□□□ -0.61
Npc1O35604 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Mir6546-201ENSMUST00000184460 62 ntBASIC11.22□□□□□ -0.61
Npc1O35604 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Npc1O35604 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.22□□□□□ -0.61
Npc1O35604 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Npc1O35604 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Gm9132-201ENSMUST00000210182 832 ntBASIC11.22□□□□□ -0.61
Npc1O35604 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npc1O35604 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npc1O35604 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Npc1O35604 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.21□□□□□ -0.61
Npc1O35604 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Npc1O35604 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Npc1O35604 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Npc1O35604 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Npc1O35604 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.21□□□□□ -0.61
Npc1O35604 Gm14585-201ENSMUST00000120713 634 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Gm7150-201ENSMUST00000122032 981 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Npc1O35604 Gm4726-201ENSMUST00000135604 736 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gm6019-201ENSMUST00000148369 736 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Gm18065-201ENSMUST00000221395 526 ntBASIC11.21□□□□□ -0.61
Npc1O35604 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.21□□□□□ -0.61
Npc1O35604 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.21□□□□□ -0.61
Npc1O35604 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.21□□□□□ -0.61
Npc1O35604 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npc1O35604 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npc1O35604 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Npc1O35604 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npc1O35604 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.21□□□□□ -0.62
Npc1O35604 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Npc1O35604 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Npc1O35604 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npc1O35604 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npc1O35604 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Npc1O35604 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Npc1O35604 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.2□□□□□ -0.62
Npc1O35604 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npc1O35604 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Npc1O35604 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.2□□□□□ -0.62
Npc1O35604 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.2□□□□□ -0.62
Npc1O35604 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Npc1O35604 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Npc1O35604 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.2□□□□□ -0.62
Npc1O35604 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms