Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm4310-201ENSMUST00000177847 889 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm8885-201ENSMUST00000189382 598 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm32999-201ENSMUST00000192693 562 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Gzmn-202ENSMUST00000225535 989 ntBASIC11.29□□□□□ -0.6
Slc1a6O35544 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc1a6O35544 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc1a6O35544 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm15370-201ENSMUST00000117158 253 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm14109-201ENSMUST00000118814 309 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm15824-201ENSMUST00000119516 955 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm14726-201ENSMUST00000120623 896 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm26047-201ENSMUST00000157308 113 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Mir1982-201ENSMUST00000157368 74 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Rprl1-202ENSMUST00000198476 238 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm26047-202ENSMUST00000198840 115 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.28□□□□□ -0.6
Slc1a6O35544 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms