Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Alx4O35137 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Rprl1-202ENSMUST00000198476 238 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Olfr284-202ENSMUST00000206647 966 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Gm45880-201ENSMUST00000213041 853 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.25□□□□□ -0.77
Alx4O35137 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Gzmn-202ENSMUST00000225535 989 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
Alx4O35137 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.25□□□□□ -0.77
Alx4O35137 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Alx4O35137 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Alx4O35137 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.25□□□□□ -0.77
Alx4O35137 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm22133-201ENSMUST00000102082 109 ntBASIC10.24□□□□□ -0.77
Alx4O35137 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Alx4O35137 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.24□□□□□ -0.77
Alx4O35137 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Gm11573-201ENSMUST00000119956 394 ntBASIC10.24□□□□□ -0.77
Alx4O35137 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.24□□□□□ -0.77
Alx4O35137 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.24□□□□□ -0.77
Alx4O35137 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.24□□□□□ -0.77
Alx4O35137 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm4157-201ENSMUST00000211647 679 ntBASIC10.24□□□□□ -0.77
Alx4O35137 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.24□□□□□ -0.77
Alx4O35137 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.24□□□□□ -0.77
Alx4O35137 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.24□□□□□ -0.77
Alx4O35137 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms