Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
B020004C17RikJ3QP07 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm15136-201ENSMUST00000120552 533 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm25604-201ENSMUST00000158359 133 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm26119-201ENSMUST00000175601 104 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm43752-201ENSMUST00000198475 697 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
B020004C17RikJ3QP07 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gm25569-201ENSMUST00000157175 131 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gm27956-201ENSMUST00000175604 260 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Gm9791-201ENSMUST00000060997 447 ntBASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
B020004C17RikJ3QP07 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms