Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.25□□□□□ -0.93
Gm12887B1AVM1 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm12887B1AVM1 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gm3329-201ENSMUST00000159873 556 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Spata33-207ENSMUST00000212760 4074 ntBASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm12887B1AVM1 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Gm13297-201ENSMUST00000120205 934 ntBASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Gm25261-201ENSMUST00000157416 134 ntBASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Gm29127-201ENSMUST00000188304 517 ntBASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.23□□□□□ -0.93
Gm12887B1AVM1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms