Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm26047-202ENSMUST00000198840 115 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm8420-201ENSMUST00000097103 598 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm24891-201ENSMUST00000104391 136 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm12217-201ENSMUST00000118858 696 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm11700-201ENSMUST00000119409 403 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Mir6927-201ENSMUST00000184494 71 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Gm10288-201ENSMUST00000084614 537 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.71□□□□□ -0.37
Prpf40aQ9R1C7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf40aQ9R1C7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm23200-201ENSMUST00000104379 132 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm28937-201ENSMUST00000185413 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm29400-201ENSMUST00000187208 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm28662-201ENSMUST00000188446 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm28251-201ENSMUST00000188835 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm37318-201ENSMUST00000194325 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm38017-201ENSMUST00000194768 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm37287-201ENSMUST00000195449 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm37793-201ENSMUST00000195548 695 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm43002-201ENSMUST00000200310 155 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms