Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm12859-201ENSMUST00000117834 427 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm8810-201ENSMUST00000172895 754 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Mir7023-201ENSMUST00000185093 64 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm807-202ENSMUST00000224929 408 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm12363-201ENSMUST00000122250 668 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm10156-201ENSMUST00000122364 462 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm38092-201ENSMUST00000195600 653 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm44872-201ENSMUST00000207864 420 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm10146-201ENSMUST00000072739 309 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms