Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm9083-201ENSMUST00000120423 819 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm27525-201ENSMUST00000184465 107 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 AA474408-201ENSMUST00000098110 3339 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco4Q9JIS3 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm11779-201ENSMUST00000118541 368 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm9522-201ENSMUST00000182394 926 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm17837-201ENSMUST00000186435 985 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms