Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ube4bQ9ES00 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube4bQ9ES00 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm24830-201ENSMUST00000102024 166 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm6266-201ENSMUST00000203844 806 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm26232-201ENSMUST00000083360 166 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube4bQ9ES00 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Nln-205ENSMUST00000224945 2486 ntBASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ube4bQ9ES00 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms