Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm8566-201ENSMUST00000120174 465 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Mir7686-201ENSMUST00000200604 57 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm45575-201ENSMUST00000210283 548 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdc40Q9DC48 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Rgr-203ENSMUST00000225070 4704 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm11667-201ENSMUST00000119828 486 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm27438-201ENSMUST00000183480 110 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdc40Q9DC48 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms