Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm8459-201ENSMUST00000162504 760 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm37835-201ENSMUST00000193305 361 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Nsd1-205ENSMUST00000224693 852 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp2aQ9DB34 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm14071-201ENSMUST00000117817 509 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm11956-201ENSMUST00000119525 512 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm3150-201ENSMUST00000166418 204 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2aQ9DB34 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms