Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm14270-201ENSMUST00000118388 846 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm15374-201ENSMUST00000119313 844 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm25554-201ENSMUST00000158075 113 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm23694-201ENSMUST00000179335 110 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm9135-201ENSMUST00000182963 990 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm8197-202ENSMUST00000193422 934 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Stag1Q9D3E6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Stag1Q9D3E6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm14807-201ENSMUST00000116640 983 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm12274-201ENSMUST00000120062 385 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm39288-201ENSMUST00000210554 446 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Stag1Q9D3E6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm8111-201ENSMUST00000117659 987 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms