Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim42Q9D2H5 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm24548-201ENSMUST00000158650 108 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm38314-201ENSMUST00000195709 625 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm10254-201ENSMUST00000052888 867 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm6091-201ENSMUST00000098307 165 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim42Q9D2H5 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm5419-201ENSMUST00000119301 527 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm16379-201ENSMUST00000161469 348 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm3890-201ENSMUST00000182416 207 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm8762-201ENSMUST00000193486 339 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm43818-201ENSMUST00000200605 466 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm7561-201ENSMUST00000211203 886 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms