Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm12217-201ENSMUST00000118858 696 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm11941-201ENSMUST00000119904 610 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Mir6927-201ENSMUST00000184494 71 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm2594-201ENSMUST00000214774 742 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx56Q9D0R4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm13809-201ENSMUST00000117921 597 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm8731-201ENSMUST00000118088 412 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm15566-201ENSMUST00000121130 590 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm3150-201ENSMUST00000166418 204 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm7848-201ENSMUST00000210739 718 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx56Q9D0R4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms