Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm8163-201ENSMUST00000122020 1060 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm26532-201ENSMUST00000180630 690 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm17797-201ENSMUST00000182175 997 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm18014-201ENSMUST00000183369 817 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm44236-201ENSMUST00000204492 513 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 CR974487.1-201ENSMUST00000220984 413 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Gm38220-201ENSMUST00000195774 1447 ntBASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lysmd1Q9D0E3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm16439-201ENSMUST00000100687 564 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm11380-201ENSMUST00000118067 560 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm16288-201ENSMUST00000137940 367 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm19927-201ENSMUST00000185792 781 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm2021-201ENSMUST00000190623 464 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm25483-201ENSMUST00000083224 227 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd1Q9D0E3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms