Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Khdc3Q9CWU5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm14724-201ENSMUST00000118400 537 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm12501-201ENSMUST00000119163 529 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm11783-201ENSMUST00000119549 885 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm12266-201ENSMUST00000120311 962 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm18065-201ENSMUST00000221395 526 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm10288-201ENSMUST00000084614 537 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Khdc3Q9CWU5 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm14028-201ENSMUST00000117434 479 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm24990-201ENSMUST00000157406 323 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm17040-202ENSMUST00000170597 889 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm8815-201ENSMUST00000173809 620 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm8100-201ENSMUST00000182906 988 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm27552-201ENSMUST00000183351 62 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm27844-201ENSMUST00000183613 62 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm2965-201ENSMUST00000198365 343 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm45113-201ENSMUST00000207518 165 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm18056-201ENSMUST00000207670 568 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm18061-201ENSMUST00000208350 562 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm18063-201ENSMUST00000208529 568 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm18052-201ENSMUST00000208750 559 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gm21811-201ENSMUST00000096485 930 ntBASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Khdc3Q9CWU5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms