Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm17827-201ENSMUST00000211825 742 ntBASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Gm18065-201ENSMUST00000221395 526 ntBASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rnf135Q9CWS1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm15782-201ENSMUST00000121073 445 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm23699-201ENSMUST00000158835 135 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Mir8093-201ENSMUST00000185043 137 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm7467-201ENSMUST00000185173 652 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm5982-201ENSMUST00000196234 512 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 AU022133-201ENSMUST00000200601 873 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm7848-201ENSMUST00000210739 718 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm4157-201ENSMUST00000211647 679 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf135Q9CWS1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm8343-201ENSMUST00000182705 994 ntBASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm37666-201ENSMUST00000194110 866 ntBASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf135Q9CWS1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms