Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12616-201ENSMUST00000118594 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm13461-201ENSMUST00000120980 662 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm22334-201ENSMUST00000158070 133 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12624-201ENSMUST00000177615 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12621-201ENSMUST00000177760 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12615-201ENSMUST00000177970 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12622-201ENSMUST00000177975 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12627-201ENSMUST00000178412 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12625-201ENSMUST00000179122 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12614-201ENSMUST00000179586 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm12613-201ENSMUST00000180323 382 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm5268-201ENSMUST00000189212 940 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm18492-201ENSMUST00000198141 1018 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm44712-201ENSMUST00000206250 1076 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm8385-201ENSMUST00000058999 643 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retreg3Q9CQV4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm11411-201ENSMUST00000117951 719 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm16571-201ENSMUST00000159112 291 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm37072-201ENSMUST00000194570 837 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm42438-201ENSMUST00000197832 974 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm17812-201ENSMUST00000204935 318 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm44585-201ENSMUST00000207150 607 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm3333-202ENSMUST00000221763 1044 ntBASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms