Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm15595-201ENSMUST00000120840 961 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm8420-201ENSMUST00000097103 598 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpa3Q9CQ71 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm9540-201ENSMUST00000188230 478 ntBASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpa3Q9CQ71 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpa3Q9CQ71 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms