Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm12463-201ENSMUST00000118271 849 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm4986-201ENSMUST00000119731 549 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm13297-201ENSMUST00000120205 934 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Snora78-201ENSMUST00000158630 128 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm8956-201ENSMUST00000203939 825 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm11511-201ENSMUST00000118146 540 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Mir1938-201ENSMUST00000158746 100 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm2553-201ENSMUST00000215986 605 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Krt88Q9CPR6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms