Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm15036-201ENSMUST00000118880 400 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm15003-201ENSMUST00000118884 446 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm5996-201ENSMUST00000211110 718 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm6390-201ENSMUST00000215034 589 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm15374-201ENSMUST00000119313 844 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm11979-201ENSMUST00000119629 743 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm8459-201ENSMUST00000162504 760 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm26989-201ENSMUST00000182608 749 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.45□□□□□ -0.9
Prpf8Q99PV0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Mir181d-201ENSMUST00000102383 72 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm11578-201ENSMUST00000118530 459 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm12036-201ENSMUST00000120008 530 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm9630-201ENSMUST00000178304 885 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm21778-201ENSMUST00000178779 471 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm9507-202ENSMUST00000180157 654 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm18968-201ENSMUST00000221319 862 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 AC140375.1-201ENSMUST00000225421 694 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms