Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Rtn4rQ99PI8 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rtn4rQ99PI8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rtn4rQ99PI8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rtn4rQ99PI8 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Rtn4rQ99PI8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm15573-201ENSMUST00000119487 540 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm3150-201ENSMUST00000166418 204 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm10807-201ENSMUST00000177134 795 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm43947-201ENSMUST00000203019 959 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rtn4rQ99PI8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm4726-201ENSMUST00000135604 736 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm6019-201ENSMUST00000148369 736 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm12407-201ENSMUST00000180219 324 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Mir8115-201ENSMUST00000184992 119 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm37986-201ENSMUST00000193285 383 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Gm8959-201ENSMUST00000213150 571 ntBASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rtn4rQ99PI8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 7.3 ms