Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm23908-201ENSMUST00000104599 132 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm5510-201ENSMUST00000117826 486 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm6939-201ENSMUST00000122029 864 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm17147-201ENSMUST00000164176 432 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm6677-201ENSMUST00000195100 441 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm24066-201ENSMUST00000104515 131 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm38314-201ENSMUST00000195709 625 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm4866-201ENSMUST00000197408 589 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm10238-201ENSMUST00000089689 408 ntBASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh23Q99PF4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Cdh23Q99PF4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Mir6396-201ENSMUST00000183603 111 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Gm42821-201ENSMUST00000199771 489 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Gm18042-201ENSMUST00000219887 790 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 AC165260.2-201ENSMUST00000225371 395 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms