Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf111Q99ML9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Mir3547-201ENSMUST00000175461 88 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 AY036118-201ENSMUST00000200021 923 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm807-202ENSMUST00000224929 408 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf111Q99ML9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.16□□□□□ -0.62
Rnf111Q99ML9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm24749-201ENSMUST00000157838 343 ntBASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.16□□□□□ -0.62
Rnf111Q99ML9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf111Q99ML9 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf111Q99ML9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf111Q99ML9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms