Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm12857-201ENSMUST00000117678 592 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm12380-201ENSMUST00000119012 544 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.12□□□□□ -0.63
Cstf3Q99LI7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.12□□□□□ -0.63
Cstf3Q99LI7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm11663-201ENSMUST00000117888 290 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm15711-201ENSMUST00000118889 535 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm11783-201ENSMUST00000119549 885 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm3329-201ENSMUST00000159873 556 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm8815-201ENSMUST00000173809 620 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms