Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm15625-201ENSMUST00000117617 1093 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm13094-201ENSMUST00000117930 409 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm44008-201ENSMUST00000204345 412 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm5178-201ENSMUST00000219380 898 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.18□□□□□ -0.14
RtcbQ99LF4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm26119-201ENSMUST00000175601 104 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Mir326-201ENSMUST00000083637 95 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.17□□□□□ -0.14
RtcbQ99LF4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RtcbQ99LF4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Olfml3-204ENSMUST00000169286 874 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm42751-201ENSMUST00000198065 559 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms