Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm27530-201ENSMUST00000184096 98 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Mir8093-201ENSMUST00000185043 137 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm37246-201ENSMUST00000192665 835 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm13611-201ENSMUST00000118269 318 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm13408-201ENSMUST00000119822 798 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm15432-201ENSMUST00000121106 195 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm15566-201ENSMUST00000121130 590 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm13935-201ENSMUST00000121859 798 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm42997-202ENSMUST00000200321 985 ntBASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdha3Q91Y16 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm23699-201ENSMUST00000158835 135 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms