Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm12241-201ENSMUST00000118330 726 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm15703-201ENSMUST00000120250 880 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm13342-201ENSMUST00000121055 207 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Mup-ps15-201ENSMUST00000121741 539 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm7809-201ENSMUST00000153199 742 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm23776-201ENSMUST00000158993 325 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm4207-201ENSMUST00000173144 960 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm44364-201ENSMUST00000198368 141 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gpr87-201ENSMUST00000056898 1080 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6023-201ENSMUST00000118217 606 ntBASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm8215-201ENSMUST00000120627 990 ntBASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm7783-201ENSMUST00000204795 781 ntBASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms