Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb1Q8R3Z5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm43522-201ENSMUST00000196697 1922 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm15018-201ENSMUST00000117090 633 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Cfap126-204ENSMUST00000129651 766 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm15914-201ENSMUST00000161922 309 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm30517-201ENSMUST00000197350 772 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb1Q8R3Z5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Mir297a-2-201ENSMUST00000103795 90 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm23931-201ENSMUST00000103842 109 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm25773-201ENSMUST00000116718 127 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm17061-201ENSMUST00000163167 499 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm44373-201ENSMUST00000196112 169 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm18062-201ENSMUST00000208020 547 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm18055-201ENSMUST00000208254 547 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 AC130673.2-201ENSMUST00000228091 797 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 1700017D01Rik-201ENSMUST00000025635 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm29730-201ENSMUST00000192986 1396 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacnb1Q8R3Z5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacnb1Q8R3Z5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms