Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Gm18734-201ENSMUST00000172937 808 ntBASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubqln1Q8R317 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm13916-201ENSMUST00000117368 628 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm13035-201ENSMUST00000117496 342 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm10807-201ENSMUST00000177134 795 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm5733-201ENSMUST00000190232 939 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Gm45113-201ENSMUST00000207518 165 ntBASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubqln1Q8R317 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm13461-201ENSMUST00000120980 662 ntBASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm8199-201ENSMUST00000121323 823 ntBASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm12566-201ENSMUST00000121479 359 ntBASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.92□□□□□ -0.66
Ubqln1Q8R317 Gm27530-201ENSMUST00000184096 98 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms