Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm25148-201ENSMUST00000104611 123 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm13445-201ENSMUST00000121664 307 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm4862-201ENSMUST00000170405 438 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm43912-201ENSMUST00000204352 538 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm8325-201ENSMUST00000099086 453 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm13047-201ENSMUST00000117116 815 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Mir1905-201ENSMUST00000122779 82 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm26989-201ENSMUST00000182608 749 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm44647-201ENSMUST00000207402 428 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm6390-201ENSMUST00000215034 589 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp7Q8R1T1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm12218-201ENSMUST00000117666 399 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm25830-201ENSMUST00000158923 132 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp7Q8R1T1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms