Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm15515-201ENSMUST00000117827 822 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm11450-201ENSMUST00000121144 333 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm25881-201ENSMUST00000157783 103 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Mir6979-201ENSMUST00000183927 56 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm5705-201ENSMUST00000066241 711 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm21811-201ENSMUST00000096485 930 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.6□□□□□ -0.55
Clip4Q8CI96 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clip4Q8CI96 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm11509-201ENSMUST00000117358 325 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm12196-201ENSMUST00000120954 262 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.59□□□□□ -0.55
Clip4Q8CI96 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clip4Q8CI96 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clip4Q8CI96 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clip4Q8CI96 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms