Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.83□□□□□ -0.35
Ccdc38Q8CDN8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.83□□□□□ -0.35
Ccdc38Q8CDN8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Gm3329-201ENSMUST00000159873 556 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Gm27530-201ENSMUST00000184096 98 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Gm45113-201ENSMUST00000207518 165 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc38Q8CDN8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm11783-201ENSMUST00000119549 885 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm8566-201ENSMUST00000120174 465 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm16505-201ENSMUST00000179981 232 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc38Q8CDN8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm11663-201ENSMUST00000117888 290 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms