Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm44651-201ENSMUST00000207343 372 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm44967-201ENSMUST00000207047 631 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm8712-201ENSMUST00000221090 701 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lrif1Q8CDD9 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Rgr-203ENSMUST00000225070 4704 ntBASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lrif1Q8CDD9 Gm14832-201ENSMUST00000121289 322 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms