Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm12529-201ENSMUST00000119529 268 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm8163-201ENSMUST00000122020 1060 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Mir6930-201ENSMUST00000183859 68 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm9353-201ENSMUST00000200472 604 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 AC139155.1-201ENSMUST00000226043 444 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gm43152-201ENSMUST00000202495 1638 ntBASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Pabpn1Q8CCS6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm38220-201ENSMUST00000195774 1447 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm38227-201ENSMUST00000193036 1602 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm8809-201ENSMUST00000119367 743 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm14108-201ENSMUST00000122234 494 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm2716-201ENSMUST00000212350 643 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Gm18030-201ENSMUST00000222163 731 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 AC122459.4-201ENSMUST00000228654 551 ntBASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pabpn1Q8CCS6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm25804-201ENSMUST00000122785 188 ntBASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Ighv1-33-201ENSMUST00000193220 350 ntBASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm38314-201ENSMUST00000195709 625 ntBASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Dcstamp-205ENSMUST00000228556 1684 ntBASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pabpn1Q8CCS6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Snora68-201ENSMUST00000104375 131 ntBASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Gm5764-201ENSMUST00000118817 885 ntBASIC17.46■□□□□ 0.39
Pabpn1Q8CCS6 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms