Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm12795-201ENSMUST00000117594 539 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm11511-201ENSMUST00000118146 540 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm15573-201ENSMUST00000119487 540 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm9192-201ENSMUST00000183221 985 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm4607-201ENSMUST00000206649 577 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm9463-201ENSMUST00000206707 601 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Gm8199-201ENSMUST00000121323 823 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Gm17831-201ENSMUST00000205579 900 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps53Q8CCB4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm26286-201ENSMUST00000104166 134 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Mir6958-201ENSMUST00000184207 73 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm29155-201ENSMUST00000185910 269 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms