Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lysmd4Q8CC84 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm5070-201ENSMUST00000177599 862 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm19309-201ENSMUST00000218295 205 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.29□□□□□ -0.76
Lysmd4Q8CC84 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm38117-201ENSMUST00000194653 939 ntBASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms