Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Gm42867-201ENSMUST00000202995 469 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Usp44Q8C2S0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm16219-201ENSMUST00000120096 274 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp44Q8C2S0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm15881-201ENSMUST00000148792 942 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm22846-201ENSMUST00000157706 270 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm23694-201ENSMUST00000179335 110 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm10731-201ENSMUST00000181171 448 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Gm23105-201ENSMUST00000083719 134 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms