Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm8162-201ENSMUST00000213951 665 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm8873-201ENSMUST00000217847 1439 ntBASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cps1Q8C196 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cps1Q8C196 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 Adgrv1-214ENSMUST00000224088 1492 ntBASIC15.21■□□□□ 0.02
Cps1Q8C196 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.21■□□□□ 0.02
Cps1Q8C196 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cps1Q8C196 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 AC166361.2-201ENSMUST00000219269 1415 ntBASIC15.2■□□□□ 0.02
Cps1Q8C196 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm11919-201ENSMUST00000117609 721 ntBASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm12337-201ENSMUST00000119634 400 ntBASIC15.2■□□□□ 0.02
Cps1Q8C196 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm16288-201ENSMUST00000137940 367 ntBASIC15.2■□□□□ 0.02
Cps1Q8C196 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm33707-201ENSMUST00000195135 569 ntBASIC15.2■□□□□ 0.02
Cps1Q8C196 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cps1Q8C196 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cps1Q8C196 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm37688-201ENSMUST00000195195 465 ntBASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm3926-201ENSMUST00000223378 1123 ntBASIC15.19■□□□□ 0.02
Cps1Q8C196 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.19■□□□□ 0.02
Cps1Q8C196 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.19■□□□□ 0.02
Cps1Q8C196 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC15.19■□□□□ 0.02
Cps1Q8C196 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.19■□□□□ 0.02
Cps1Q8C196 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC15.19■□□□□ 0.02
Cps1Q8C196 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cps1Q8C196 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.18■□□□□ 0.02
Cps1Q8C196 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Gm43667-201ENSMUST00000198616 1095 ntBASIC15.18■□□□□ 0.02
Cps1Q8C196 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC15.18■□□□□ 0.02
Cps1Q8C196 CT010505.2-201ENSMUST00000227918 998 ntBASIC15.18■□□□□ 0.02
Cps1Q8C196 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms