Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm12247-201ENSMUST00000117585 670 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm24844-201ENSMUST00000158679 127 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm6905-201ENSMUST00000205729 511 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm5363-201ENSMUST00000211927 938 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trub1Q8C0D0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trub1Q8C0D0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Gm37835-201ENSMUST00000193305 361 ntBASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Gm7504-201ENSMUST00000201449 424 ntBASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trub1Q8C0D0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm14193-201ENSMUST00000105067 153 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm22711-201ENSMUST00000116890 133 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm4909-201ENSMUST00000118749 794 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms