Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm13351-201ENSMUST00000118087 414 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm23694-201ENSMUST00000179335 110 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm43671-201ENSMUST00000200422 433 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm7082-201ENSMUST00000209880 969 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm4604-201ENSMUST00000025040 390 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm8325-201ENSMUST00000099086 453 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcal1Q8BJL0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm24791-201ENSMUST00000104284 131 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm21778-201ENSMUST00000178779 471 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm9081-201ENSMUST00000182346 991 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Mir7051-201ENSMUST00000184167 73 ntBASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcal1Q8BJL0 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.27□□□□□ -0.44
Smarcal1Q8BJL0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smarcal1Q8BJL0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcal1Q8BJL0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms