Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2bQ8BJF9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2bQ8BJF9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm18065-201ENSMUST00000221395 526 ntBASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2bQ8BJF9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm38117-201ENSMUST00000194653 939 ntBASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Rps4l-202ENSMUST00000204242 789 ntBASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2bQ8BJF9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms