Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp6nlQ80XC3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm25148-201ENSMUST00000104611 123 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm13445-201ENSMUST00000121664 307 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm11354-201ENSMUST00000121974 422 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm25545-201ENSMUST00000122673 323 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm43778-201ENSMUST00000199438 199 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm44647-201ENSMUST00000207402 428 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp6nlQ80XC3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm15003-201ENSMUST00000118884 446 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm16030-201ENSMUST00000159098 603 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm29067-201ENSMUST00000190821 470 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm7902-201ENSMUST00000198842 947 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm6423-201ENSMUST00000204315 934 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.71□□□□□ -0.37
Usp6nlQ80XC3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp6nlQ80XC3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp6nlQ80XC3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms