Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm11663-201ENSMUST00000117888 290 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm12196-201ENSMUST00000120954 262 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm3329-201ENSMUST00000159873 556 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm8459-201ENSMUST00000162504 760 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm43966-201ENSMUST00000203301 612 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.29□□□□□ -0.6
Ccdc116Q80X53 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm18734-201ENSMUST00000172937 808 ntBASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc116Q80X53 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Btrc-209ENSMUST00000224478 2194 ntBASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc116Q80X53 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms